BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB005B12SP1|AL425341
(940 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1446 1634 0.0
>3x_Contig1446
Length = 10598
Score = 1634 bits (796), Expect = 0.0
Identities = 872/927 (94%), Gaps = 2/927 (0%)
Strand = Plus / Minus
Query: 1 cttgtcaatattatataactcataatcttttaaacgacaccagatcatcgcacctcacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9639 cttgtcaatattatataactcataatcttttaaacgacaccagatcatcgcacctcacaa 9580
Query: 61 taagaggttcacggtaaagatggtatgamatataaatgtaaaacttacttttgamacttt 120
|||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||
Sbjct: 9579 taagaggttcacggtaaagatggtatgaaatataaatgtaaaacttacttttgaaacttt 9520
Query: 121 atgtttaaataatgtacagagatagtctaaagagtatttagatccaaaatmagggggaaa 180
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 9519 atgtttaaataatgtacagagatagtctaaagagtatttagatccaaaataagggggaaa 9460
Query: 181 atgcttcgaaggtgagaacttttgagaacacaccaactaamatttgtacgaactgataat 240
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 9459 atgcttcgaaggtgagaacttttgagaacacaccaactaaaatttgtacgaactgataat 9400
Query: 241 taatcatttgatgatcacgtagkagnaatgtttgamgtagagaaccgtaagtytccgagt 300
|||||||||||||||||||||| ||||||||| |||||||||||||||| |||||||
Sbjct: 9399 taatcatttgatgatcacgtagtgagaatgtttgaagtagagaaccgtaagtttccgagt 9340
Query: 301 tttacagatgtcttgttaagtccaccgttagacttagcttttgtmattytyttttcgtaa 360
|||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||
Sbjct: 9339 tttacagatgtcttgttaagtccaccgttagacttagcttttgtaatttttttttcgtaa 9280
Query: 361 tagattcataatamgtytgtmttacyatyatyatymtygtgtatcagagtggagaggmtc 420
||||||||||||| || ||| |||| || || || | ||||||||||||||||||| ||
Sbjct: 9279 tagattcataataagtttgtattactattattattattgtgtatcagagtggagaggatc 9220
Query: 421 tcyatgtcaaayagagagaactcttaatgcygtgttaamacyaatgagtgamtgcmtgtg 480
|| |||||||| |||||||||||||||||| ||||||| || ||||||||| ||| ||||
Sbjct: 9219 tctatgtcaaatagagagaactcttaatgctgtgttaaaactaatgagtgaatgcatgtg 9160
Query: 481 cmggggaaamsatttmmttytygtytcagamaasmmattctttggacgtyaammtgttgt 540
| ||||||| |||| || | || ||||| || ||||||||||||| || ||||||
Sbjct: 9159 caggggaaaagatttaatttttgtttcagaaaagaaattctttggacgttaaaatgttgt 9100
Query: 541 gtgatgagattyaacagtcaaccaaatcgatggcttgccagtsgactgcactacattggt 600
||||||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct: 9099 gtgatgagatttaacagtcaaccaaatcgatggcttgcaagtggactgcactacattggt 9040
Query: 601 caccaatggmttcmtcgtacaagtcgtagaattcacctgayagacattggtagamgacat 660
||||||||| ||| |||||||||| ||||||||||||||| ||||||||||||| |||||
Sbjct: 9039 caccaatggattcatcgtacaagttgtagaattcacctgatagacattggtagaagacat 8980
Query: 661 cactgtcacctagagccaagttaccttctggagtcaaagcccaacccttagcatagatgg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8979 cactgtcacctagagccaagttaccttctggagtcaaagcccaacccttagcatagatgg 8920
Query: 721 caccagcttgtggtggtggaccatcgaattggaattgtctgttagcaacaatggaaccta 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8919 caccagcttgtggtggtggaccatcgaattggaattgtctgttagcaacaatggaaccta 8860
Query: 781 atctaccgctaccgtctgttagaacagcgtctttcaaagtcatggacaaagtaccgttgt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8859 atctaccgctaccgtctgttagaacagcgtctttcaaagtcatggacaaagtaccgttgt 8800
Query: 841 tcttacaggattgagcagtgactgggtcggtagagtcagtcgcttttgaagagctggtgg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8799 tcttacaggattgagcagtgactgggtcggtagagtcagtcgcttttgaagagctggtgg 8740
Query: 901 -agcagtggaag-accggtcttggtgg 925
||||||||||| ||||||||||||||
Sbjct: 8739 aagcagtggaagaaccggtcttggtgg 8713
Score = 407 bits (198), Expect = e-113
Identities = 253/274 (92%)
Strand = Plus / Plus
Query: 550 ttyaacagtcaaccaaatcgatggcttgccagtsgactgcactacattggtcaccaatgg 609
|| ||||||||||||||||||| ||||| ||| ||||| ||||||| ||| | | |
Sbjct: 4656 tttaacagtcaaccaaatcgatagcttgtaagtagactggtgtacattgttcagcgacgt 4715
Query: 610 mttcmtcgtacaagtcgtagaattcacctgayagacattggtagamgacatcactgtcac 669
||| |||||||||| |||||| |||||||| ||||||||||||| ||||||||||||||
Sbjct: 4716 tttcatcgtacaagttgtagaagtcacctgatagacattggtagaagacatcactgtcac 4775
Query: 670 ctagagccaagttaccttctggagtcaaagcccaacccttagcatagatggcaccagctt 729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4776 ctagagccaagttaccttctggagtcaaagcccaacccttagcatagatggcaccagctt 4835
Query: 730 gtggtggtggaccatcgaattggaattgtctgttagcaacaatggaacctaatctaccgc 789
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4836 gtggtggtggaccatcgaattggaattgtctgttagcaacaatggaacctaatctaccgc 4895
Query: 790 taccgtctgttagaacagcgtctttcaaagtcat 823
||||||||||||||||||| |||||||| |||||
Sbjct: 4896 taccgtctgttagaacagcatctttcaaggtcat 4929
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.42 0.718 1.35
Gapped
Lambda K H
1.42 0.718 1.35
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3928
Number of Sequences: 1807
Number of extensions: 3928
Number of successful extensions: 76
Number of sequences better than 1.0e-20: 1
length of query: 940
length of database: 10,358,551
effective HSP length: 16
effective length of query: 924
effective length of database: 10,329,639
effective search space: 9544586436
effective search space used: 9544586436
T: 0
A: 40
X1: 5 (10.3 bits)
X2: 14 (28.7 bits)
S1: 11 (23.1 bits)
S2: 49 (101.1 bits)